PhylomeDB has been recently expanded with the incorporation of eight new arthropoda species. This is part of our current efforts to coordinate our analysis with those of other annotation platforms. In this case, this is a joint effort with ArthropodaCyc, and the eight new arthropod phylomes have...
Welcome to PhylomeDB
PhylomeDB is a public database for complete collections of gene phylogenies (phylomes). It allows users to interactively explore the evolutionary history of genes through the visualization of phylogenetic trees and multiple sequence alignments. Moreover, phylomeDB provides genome-wide orthology and paralogy predictions which are based on the analysis of the phylogenetic trees. The automated pipeline used to reconstruct trees aims at providing a high-quality phylogenetic analysis of different genomes , including Maximum Likelihood or Bayesian tree inference, alignment trimming and evolutionary model testing. PhylomeDB includes also a public download section with the complete set of trees, alignments and orthology predictions.
Latest News
Eight new arthropoda species in PhylomeDB
Fri, 04/20/2012 - 15:44
PhylomeDB trees accessible through Genolevures
Thu, 02/09/2012 - 11:55
Candida albicans phylome accessible through Candida Genome Database
Mon, 04/04/2011 - 14:50
PhylomeDB cross linking
Comparative Genomics Group at CRG (Barcelona, Spain)